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Job DescriptionP39304
Confidence98.10%DateThu Jan 5 11:59:08 GMT 2012
Rank152Aligned Residues173
% Identity16%Templatec1nvmG_
PDB info PDB header:lyase/oxidoreductaseChain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20..... ....30...... ...40.........50.........60.........70.........80.
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Query Sequence  TMDSAYETTRLI. AEEVDIIEVGT. . . . . . . . . . . ILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANA
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Template Sequence  TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGA
Template Known Secondary structure 
TT
SS
TTSTT

BTTTB

SS
TT
SSS
BTTB
T
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   82.......90. ........100.........110... ......120 .........130.........140.........150....
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Query Sequence  DWVTVICCAD. INTAKGALDVAKEFNGDVQIEL. . TGYWTWE. . . . QAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADIT
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Template Sequence  RVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIY. . MADSGGAMSMNDIRDRMR
Template Known Secondary structure 
TT
GGGGTT
TGGGS
T
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   108.110.........120.........130.........140.........150.........160....... ..170.........180.....
 
   155....160.........170 .........180........
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Query Sequence  AIKRLSDMGFKVTVTG. . . . GLALEDLPLFKGIPIHVF
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Template Sequence  AFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRV
Template Known Secondary structure  S
TTS
B
TTS
TT

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   186...190.........200.........210.........220...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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