Job Description P39304 Confidence 96.83% Date Thu Jan 5 11:59:08 GMT 2012 Rank 232 Aligned Residues 195 % Identity 11% Template c1gehE_ PDB info PDB header:lyase Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase) Resolution 2.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
Predicted Secondary structure														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		T	M	D	S	A	Y	E	T	T	R	L	I	.	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	.	.	.	.	.	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	S	R	M	C	F	E	A	N
Query Conservation														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence														.															.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		S	P	E	E	F	E	K	L	A	Y	D	L	L	S	N	G	A	D	Y	M	K	D	D	E	N	L	T	S	P	W	Y	N	R	F	E	E	R	A	E	I	M	A	K	I	I	D	K	V	E	N	E	T	G	E	K	K	T	W	F	A	N	I	T	A	D	L	L	E	M	E	Q	R	L	E	V	L	A	D	L	G
Template Known Secondary structure																T	T								T	T					T	T	S																				T		S							B			S	S															T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																															.	.	.	.	.	.	.	.	.	.								.
Query SS confidence												.																															.	.	.	.	.	.	.	.	.	.								.
Query Sequence		A	D	W	V	T	V	I	C	C	A	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	.	.	.	.	.	.	.	.	.	.	Q	A	Q	Q	W	R	D	.	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W
Query Conservation												.																															.	.	.	.	.	.	.	.	.	.								.
Alig confidence												.																															.	.	.	.	.	.	.	.	.	.								.														.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		L	K	H	A	M	V	D	V	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P	Y	H	G	I	S	M	F	V	L	A	K	L	Y	R	L	I	G	I	D	Q	L	H	V	G	T	A	E	G	.	.	.	.	G	K	W	D
Template Known Secondary structure																											T	T								T	T	T					S		T	T	S															T		S									T	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.																		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.														.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.														.
Query Sequence		G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	.	G	I	P	I	H	V	F	I	A	.	G	R	S	I	R	D	A	A	S	P	V	E	A	.	A	R	Q	F	K
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.														.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.														.
Template Conservation
Template Sequence		V	I	Q	N	A	R	I	L	R	E	S	H	Y	K	P	D	E	N	D	V	F	H	L	E	Q	K	F	Y	S	I	K	A	A	F	P	T	S	S	G	G	L	H	P	G	N	I	Q	P	V	I	E	A	L	G	T	D	I	V	L	Q	L	G	G	G	T	L	G	H	P	D	G	P	A	A	G	A	R	A	V	R
Template Known Secondary structure												S						T	T			S							T	T										S	S			T	T	T								T		S	S	S					S					S		T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		209	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	I	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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