|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | D | G | L | A | V | T | A | M | R | Q | A | L | N | D | V | A | F | R | G | R | V | V | I | G | E | G | E | I | D | H | A | P | M | L | W | I | G | E | E | V | G | K | G | D | G | P | E | V | D | I | A | V | D | P | I | E | G | T | R | M | V | A | M | G | Q | S | N | A | L | A | V | M | A | F | A | P | R | D |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |   |
|
Template Sequence |   |
I | A | D | R | K | A | H | E | A | I | V | A | I | L | N | E | T | P | F | P | V | L | S | E | E | G | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
X | D | Y | A | V | R | R | G | W | D | T | L | W | I | V | D | P | L | D | G | T | K | E | F | I | K | R | N | G | E | F | T | V | N | I | A | L | V | Q | N | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |
|  |  |  | T | T |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
110 | . | . | . | |
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | L | H | . |
. |
A | P | D | M | Y | M | K | K | L | V | V | N | R | L | A | A | G | A | . |
. |
. |
. |
. |
. |
. |
. |
I | D | L | S | L | P | L | T | D | N | L | R | N | V | A | K | A | L | G | K | P | L | D | K | L | R | M | V | T | L | D | K | . |
. |
. |
. |
P | R | L | S | A | A | I | E | E | A | T | Q |
Query Conservation |   |
  |
|
|   | . | . |
|
|
|   |
|
|   |
|
|   |
|
|
|   |   |   |
|   | . | . | . | . | . | . | . | . |
|
|
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |   |   |
|
|
|
|   |
|
|
|
| . | . | . | . |
|
|
|   |   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | P | V | X | G | V | I | Y | V | P | V | K | K | E | L | Y | F | A | V | E | G | T | G | A | Y | K | S | G | I | V | G | L | E | D | E | G | V | T | L | Q | Q | X | I | E | K | S | E | R | X | P | L | A | D | A | R | D | H | F | I | A | V | A | S | R | S | H | L | T | P | E | T | E | T | Y | I | A | D | L | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T | T |  |  |  |
|
|
|
|
| S |
|
| S | S | S |
|
|  |  |  |  |  |  |  | S |
| B | S | S |
|
|
|
|
| S | S |  |  |  |  |  |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
. | |
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | V | K | V | F | A | L | P | D | G | D | V | A | A | S | V | L | T | C | W | Q | D | N | P | Y | D | V | M | Y | T | I | G | G | A | . |
P | . |
E | G | V | I | S | A | C | A | V | K | A | L | G | G | D | M |
Query Conservation |   |
  |
|
|
|
|   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |   | . | . |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|
Template Sequence |   |
K | H | G | N | V | E | L | I | S | S | G | S | S | I | K | I | C | L | V | A | E | G | K | A | . |
. |
D | V | Y | P | R | F | A | P | T | X | E | W | D | T | A | A | G | H | A | I | A | R | A | A | G | X | E | V |
Template Known Secondary structure |   |
 |
| T | T |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |  |  | T | S |
| . | . | S | B |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |