Phyre 2 alignment of P77091 with c1dxzA

Job Description P77091
Confidence 1.74% Date Thu Jan 5 12:25:33 GMT 2012

Rank 31 Aligned Residues 18

% Identity 28% Template c1dxzA_

PDB info PDB header:transmembrane protein Chain: A: PDB Molecule:acetylcholine receptor protein, alpha chain; PDBTitle: m2 transmembrane segment of alpha-subunit of nicotinic2 acetylcholine receptor from torpedo californica, nmr, 203 structures

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	11	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence	I	V	L	C	L	T	V	L	G	.	.	.	.	F	T	L	L	V	G	D	S	L
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence	M	T	L	S	I	S	V	L	L	S	L	T	V	F	L	L	V	I	V	E	L	I
Template Known Secondary structure																						T
Template Predicted Secondary structure
Template SS confidence
	243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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