Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE1
Confidence89.32%DateThu Jan 5 11:23:06 GMT 2012
Rank4Aligned Residues133
% Identity10%Templatec2vu4A_
PDB info PDB header:photosynthesisChain: A: PDB Molecule:oxygen-evolving enhancer protein 2; PDBTitle: structure of psbp protein from spinacia oleracea at 1.98 a2 resolution
Resolution1.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80. ...... ..90.........100......... 110.........120.
Predicted Secondary structure 





















....






.






Query SS confidence 


































. .





. .





















.











Query Sequence  DGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQ. . KAVIVI. . MGDDPKEDLAVLAKRLEDQQRS. RDPQLQVVTNKA
Query Conservation   


 



 
 



 
 
 
 
   



   
.. 




..
 
 
   
  
   
  

 
.
 
  
  



Alig confidence 

.








..




















..





..





















.











Template Conservation 

.


  
 

..         
      
  
    
 
 
 
        

                   
     
Template Sequence  DG. FKLLVPSKW. . NPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGVASANVLESST
Template Known Secondary structure  SS.TT
..




STT
TT
TTS
S
SSGGGG
STGGGG




Template Predicted Secondary structure 

.




..



























Template SS confidence 















































































   24. ....30.... .....40.........50.........60.........70.........80.........90.........100
 
   122.......130.........140.........150.........160....... ..170.........180....
Predicted Secondary structure 














.
Query SS confidence 













































.
















Query Sequence  IELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADD. QQKAQTTAENIINTLVI
Query Conservation 
 


  
 



  
 

    

 

   
 

 



 
 
 
. 
 
 

 
 

 

  
Alig confidence 




























..














.
















Template Conservation      
  

  
     
 

 
    
 .. 
 

 
    

  
       
     

 
Template Sequence  PVVDGKQYYSITVLTREGGKHQVIAATVK. . DGKLYICKAQAGDKRWFKGAKKFVESATSSFSV
Template Known Secondary structure 
TT




..TTTT
Template Predicted Secondary structure 









..








Template SS confidence 































































   119120.........130.........140....... ..150.........160.........170.........180
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions