Return to main results Retrieve Phyre Job Id

Job DescriptionP63284
Confidence95.98%DateThu Jan 5 12:08:03 GMT 2012
Rank349Aligned Residues113
% Identity13%Templated1rifa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases DNA helicase UvsW
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   573......580.........590.........600.........610.........620.... .....630......... 640........
Predicted Secondary structure 














..






..



Query SS confidence 



















































. .














. .








Query Sequence  QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD. . SDEAMVRIDMSEFME. . KHSVSRLVG
Query Conservation 
  
   
                
    

 

 
 


 

 


     ..    



  

   ..        
Alig confidence 










...............

























..














..








Template Conservation 
   
   
  ...............   

   





      
           


 
   
  
          
Template Sequence  QKDAVFEGLVN. . . . . . . . . . . . . . . RRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRL
Template Known Secondary structure  ...............S


TTS

SS
SSTS
Template Predicted Secondary structure 
...............














Template SS confidence 















































































   118.120........ .130.........140.........150.........160.........170.........180..
 
   649650.........660....... ..670.........680.........690.........700
Predicted Secondary structure 






.....................









Query SS confidence 


















. . . . . . . . . . . . . . . . . . . . .
































Query Sequence  APPGYVGYEEGGYLTEAVR. . . . . . . . . . . . . . . . . . . . . RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT
Query Conservation     
         
     .....................     

 



      
   
   
  
   
Alig confidence 


















.....................
































Template Conservation                          


 
   
             






                    
Template Sequence  FSHAMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGKSISSIISGLNNCMFK
Template Known Secondary structure 

GGG
STT
SSTT


TT
S
TTS
GGGGGGTGGG

TTT
TT

Template Predicted Secondary structure 


































Template SS confidence 








































































   183......190.........200.........210.........220.........230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions