349 d1rifa_ Probab=95.98   E-value=0.0086  Score=35.43  Aligned_columns=113  Identities=13%

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC--CCCCEEEEEHHHCCC--CCHHHHHCC
Q ss_conf             6899999998887886144465666618998579830589999999997348--888658855123044--101355304
Q batch____       573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD--SDEAMVRIDMSEFME--KHSVSRLVG  648 (857)
Q Consensus       573 q~~a~~~i~~~~~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~la~aLA~~~~~--~~~~liri~~se~~~--~~~~~~~~g  648 (857)
                      |.+++..+...               ...++.+|+|.|||.++-+++..+..  ....++-+......+  .....++.+
T Consensus       118 Q~~~i~~~l~~---------------~~~ii~~~tGsGKT~~~~~~i~~~~~~~~~~~lii~p~~~L~~q~~~~~~~~~~  182 (282)
T d1rifa_         118 QKDAVFEGLVN---------------RRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRL  182 (282)
T ss_dssp             HHHHHHHHHHH---------------SEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECSSHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHC---------------CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCC
T ss_conf             99999999847---------------985999368881379999999999742798099995528999999999998607


Q ss_pred             CCCCCCCHHHHHHHHHHHH---------------------CCCCCEEEEECHHHCCHHHHHHHHHHHHCCEEE
Q ss_conf             6664310011126899996---------------------089988999330566989999999996237056
Q batch____       649 APPGYVGYEEGGYLTEAVR---------------------RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT  700 (857)
Q Consensus       649 ~~~g~~~~~~~~~l~~~~~---------------------~~~~~vi~lDei~~~~~~v~~~l~~~l~~g~~~  700 (857)
                      ..+..++....+.......                     ...+.+|++||.+..........+..+.+.+..
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~iii~t~~~l~~~~~~~~~~~~~vIiDEaH~~~~~~~~~~~~~~~~~~~~  255 (282)
T d1rifa_         183 FSHAMIKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGKSISSIISGLNNCMFK  255 (282)
T ss_dssp             CCGGGEEECSTTCSSTTCCCTTCSEEEECHHHHTTSCGGGGGGEEEEEEETGGGCCHHHHHHHTTTCTTCCEE
T ss_pred             CCCCCEEECCCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEE
T ss_conf             5774200001675300011343578897399998878842312528998380027683389999822437859