 |
Job Description | P0AB35 | Confidence | 3.03% | Date | Thu Jan 5 11:14:31 GMT 2012 |
Rank | 95 | Aligned Residues | 41 |
% Identity | 10% | Template | c3p8dB_ |
PDB info |
PDB header:protein binding | Chain: B: PDB Molecule:medulloblastoma antigen mu-mb-50.72; |
PDBTitle: crystal structure of the second tudor domain of human phf20 (homodimer2 form)
|
Resolution | 2.00 Å |
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | N | Q | I | Q | G | S | L | Q | E | S | D | T | Y | T | T | T | Q | Q | R | C | K | T | V | Y | D | K | S | E | K | M | L | G | Y | D | V | T | Y | K | I | G | D | Q | Q | G | K | I | R |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|   |   |
|   |   |   |   |   | . | . | . | . | . | . | . |
|   |
|   |
| . |
|
|
|   |   |   |   |
|
|
Template Sequence |   |
I | N | E | Q | V | L | A | C | W | S | D | C | R | F | Y | P | A | K | V | T | A | V | N | K | D | G | T | . |
. |
. |
. |
. |
. |
. |
Y | T | V | K | F | . |
Y | D | G | V | V | Q | T | V | K |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
| T | T | S |  | . | . | . | . | . | . | . |  |  |  |  |  | . | T | T | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|