 |
| Job Description | P0AB35 | | Confidence | 4.51% | Date | Thu Jan 5 11:14:31 GMT 2012 |
| Rank | 42 | Aligned Residues | 29 |
| % Identity | 17% | Template | c3mlhA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:hemagglutinin; |
PDBTitle: crystal structure of the 2009 h1n1 influenza virus hemagglutinin2 receptor-binding domain
|
| Resolution | 2.09 Å |
|
| | |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|  | | | | |  |
|
|
|
|
|
|
| | | | | | | | | | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | D | Q | Q | G | K | I | R | M | D | R | D | P | G | T | Q | I | P | L | D | S | N | G | Q | L | I | L | N | N |
| Query Conservation | |
|
| | |
|
|
|
|
| | | |
|
| | |
| |
| |
| |
| |
|
|
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| | |
|
|
| | |
|
|
|
|
|
| |
| | |
|
|
|
|
|
|
| |
| Template Sequence | |
E | G | R | M | N | Y | Y | W | T | L | V | E | P | G | D | K | I | T | F | E | A | T | G | N | L | V | V | P | R |
| Template Known Secondary structure | |
| S | | | | | | | | | |
| T | T |
| | | | | | | S | S |
| | | | | S |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | |
|
|
|
| | | | | | | |
|
| | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
