Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB35
Confidence9.23%DateThu Jan 5 11:14:31 GMT 2012
Rank18Aligned Residues16
% Identity31%Templatec1amlA_
PDB info PDB header:serine protease inhibitorChain: A: PDB Molecule:amyloid a4; PDBTitle: the alzheimer`s disease amyloid a4 peptide (residues 1-40)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80....
Predicted Secondary structure 




Query SS confidence 















Query Sequence  NRITGSVLGAVAGGVI
Query Conservation      
 
 
   

 
Alig confidence 















Template Conservation 















Template Sequence  GSNKGAIIGLMVGGVV
Template Known Secondary structure  SSS

SSTTTT
Template Predicted Secondary structure 








Template SS confidence 















   25....30.........40
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions