Job Description P31440 Confidence 3.32% Date Thu Jan 5 11:47:30 GMT 2012 Rank 68 Aligned Residues 251 % Identity 12% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	I	S	N	I	P	L	S	L	R	I	G	I	T	S	G	I	G	L	F	I	A	L	M	G	L	K	N	T	G	V	I	V	A	N	K	D	T	L	V	M	I	G	D	L	S	S	H	G	V	L	L	G	I	L	G	F	F	I	I	T	V	L	S	S	R	H	F	H	A	A	V	L	V	S	I	V	V	T
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	L	R	L	V	C	F	L	T	L	L	G	V	T	A	A	L	F	I	F	A	V	D	L	A	V	H	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	R	M	K	I	S	R	L	A	G	R	F	A	G	Y	I	L	Y	V	V	S	G	V	A	L	C	L	L	S	T
Template Known Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.																			.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.																			.	.	.	.	.
Query Sequence		S	C	C	G	L	F	F	G	D	V	H	F	S	G	V	Y	S	I	P	P	D	I	S	G	V	I	G	E	V	D	L	S	G	A	L	T	L	E	L	A	G	I	I	F	S	F	M	L	I	N	L	F	.	.	.	.	.	D	S	S	G	T	L	I	G	V	T	D	K	A	G	L	I	D	G	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.																			.	.	.	.	.
Alig confidence																																																						.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		F	W	C	A	V	L	S	T	E	A	E	G	S	G	L	P	Q	M	K	S	I	L	S	G	F	Y	D	K	M	R	S	A	L	E	L	R	V	L	F	A	K	A	L	G	L	I	C	A	I	G	G	G	L	P	V	G	W	E	G	P	N	V	H	I	A	C	I	I	A	H	Q	F	Y	R	L	G	V	F	K	E
Template Known Secondary structure							S		G	G	G		B		S									T	T	T					G	G	G	G	S																	T	T		S		B	S																T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																	.																															.	.	.	.
Query SS confidence																																	.																															.	.	.	.
Query Sequence		N	G	K	F	P	N	M	N	K	A	L	Y	V	D	S	V	S	S	V	A	G	A	F	I	G	T	S	S	V	T	A	.	Y	I	E	S	T	S	G	V	A	V	G	G	R	T	G	L	T	A	V	V	V	G	V	M	F	L	L	V	M	F	.	.	.	.	F	S	P	L	V	A	I	V	P	P	Y	A	T	A
Query Conservation																																	.																															.	.	.	.
Alig confidence																																	.																															.	.	.	.
Template Conservation
Template Sequence		L	C	T	D	R	A	L	R	L	Q	T	L	A	A	A	C	A	V	G	L	A	S	S	F	G	A	P	L	G	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	E	L	D	V	S	R	T	Q	T	L	L	Y	A	I	L	G	A	L	M
Template Known Secondary structure					S																					T													T		S	S			T	T																T	T						S		T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	I	F	V	G	V	L	M	T	S	S	L	A	R	V	N	W	D	D	F	T	E	S	V	P	A	F	I	T	T	V	M	M	P	F	T	F	S	I	T	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	L	G	A	L	F	I	R	C	V	R	S	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L	Q	Y	P
Template Known Secondary structure																					S	S	S	T	T			T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions