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| Job Description | P31440 | | Confidence | 5.13% | Date | Thu Jan 5 11:47:30 GMT 2012 |
| Rank | 22 | Aligned Residues | 26 |
| % Identity | 27% | Template | c3iysA_ |
| PDB info |
PDB header:virus | Chain: A: PDB Molecule:major capsid protein vp1; |
PDBTitle: homology model of avian polyomavirus asymmetric unit
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| Resolution | 11.30 Å |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
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| Query Sequence | |
N | N | D | N | T | D | Y | V | S | N | E | S | G | T | L | S | R | L | F | K | L | P | Q | H | G | T | T | V | R | T |
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| Template Conservation | |
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| Template Sequence | |
D | Q | R | G | R | Q | Y | W | R | G | . |
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L | P | R | Y | F | S | I | Q | L | R | K | R | N | V | R | N |
| Template Known Secondary structure | |
| G | G | G |
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| Template Predicted Secondary structure | |
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| Template SS confidence | |
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263 | . | . | . | . | . | . | 270 | . | . | |
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. | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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