Return to main results Retrieve Phyre Job Id

Job DescriptionP31440
Confidence5.53%DateThu Jan 5 11:47:30 GMT 2012
Rank18Aligned Residues30
% Identity13%Templatec3bu8B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:telomeric repeat-binding factor 2; PDBTitle: crystal structure of trf2 trfh domain and tin2 peptide2 complex
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.....
Predicted Secondary structure 














Query SS confidence 





























Query Sequence  TDYVSNESGTLSRLFKLPQHGTTVRTELIA
Query Conservation                
           
  
Alig confidence 





























Template Conservation 

 

 
 


 
 
        

 


 
Template Sequence  NKEFEKASKILKKHMSKDPTTQKLRNDLLN
Template Known Secondary structure  TT




TTT
Template Predicted Secondary structure 








Template SS confidence 





























   168.170.........180.........190.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions