Job Description P31440 Confidence 3.93% Date Thu Jan 5 11:47:30 GMT 2012 Rank 48 Aligned Residues 230 % Identity 10% Template c2xq2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt Resolution 2.73 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	F	I	I	T	V	L	S	S	R	H	F	H	A	A	V	L	V	S	I	V	V	T	S	C	C	G	L	F	F	G	D	V	H	F	S	G	V	Y	S	I	P	P	D	I	S	G	V	I	G	E	V	D	L	S	G	A	L	T	L	E	L	A	G	I	I	F	S	F	M	L	I	N	L	F	D	S	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	V	F	A	A	F	L	A	L	I	V	P	F	L	V	V	L	P	G	I	A	A	Y	V	I	T	S	D	P	Q	L	M	A	S	L	G	N	L	P	S	A	A	N	A	D	K	A	Y	P	W	L	T	Q	F	L	P	V	G	V	K	G	V	V	F	A	A	L	A	A	A	I	V	S	S	L	A	S	M	L
Template Known Secondary structure										T	T	T						T											T														S	T	B	G	G	G								T	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.														.	.	.	.	300	.	.														.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	I	G	V	T	D	K	A	G	L	I	D	G	N	G	K	F	P	N	M	N	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	V	D	S	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	G	A	F	I	G	T	S	S	V	T	A	Y	I	E	S	T	S	G	V	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	A	L	I	A	P	M	L	G	G	I	G	Q	C	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	K
Template Known Secondary structure												T					T		S																										G	G	G	G	G	G		B											T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.					350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.												.	.	.	.	.	390
Predicted Secondary structure																										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	G	R	T	G	L	T	A	V	V	V	G	V	M	F	L	L	V	M	F	F	S	P	.	.	.	.	L	V	A	I	V	P	P	Y	A	T	A	G	A	L	I	F	V	G	V	L	M	T	S	S	L	A	R	V	N	W	D	D	F	T	E	.	.	.	.	.	.	.	.	.	.	.	S	V	P	A	F	I
Query Conservation																										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G	I	S	V	T	S	S	M	F	V	T	D	R	S	F	N	I	A	A	Y	G
Template Known Secondary structure																								S	S																													S	S	S	S		T	T						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		391	.	.	.	.	.	.	.	.													400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	V	M	M	P	F	T	F	.	.	.	.	.	.	.	.	.	.	.	.	S	I	T	E	G	I	A	L	G	F	M	S	Y	C	I	M	K	V	C	T	G	R
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	M	I	V	L	A	V	L	Y	T	L	F	W	V	N	A	D	A	E	I	T	L	I	I	F	G	V	M	A	G	V	I	G	T	I	L	L	I	S	Y	G	I	K
Template Known Secondary structure																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions