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Job DescriptionP31440
Confidence5.88%DateThu Jan 5 11:47:30 GMT 2012
Rank17Aligned Residues199
% Identity13%Templatec2ht2B_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex
Resolution3.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GTLSRLFKLPQHGTTVRTELI. AGMTTFLTMVYIVFVNPQILGAAQMDPKVV. . . . . FVTTCLIAGIGSIAMGIFANLPV
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Template Sequence  RMVLDIFRLKGDE. . ARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVA
Template Known Secondary structure  TT

S..T
TTTTS
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TT

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   160.........170.. .......180.........190.........200.........210.........220.........230.......
 
   88.90.........100.........110.........120........ .130.........140... ......150.........160.
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Query Sequence  ALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLL. . TLFRIRYWMISNIPL. . . . SLRIGITSGIGLFIALMG
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Template Sequence  LIDVGK. . . . . . . . . LSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFV
Template Known Secondary structure  S




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GGGTTTT
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   238.240... ......250.........260.........270.........280.........290.........300........
 
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Query Sequence  LKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVL. . SSRHFHAAVLVSIVVTSCCGLFFG
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Template Sequence  APATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFG
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GGGSS
STTTT
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   309310.........320.........330.........340.........350.........360.........370..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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