Return to main results Retrieve Phyre Job Id

Job DescriptionP77495
Confidence28.55%DateThu Jan 5 12:29:54 GMT 2012
Rank48Aligned Residues132
% Identity14%Templatec3pdiG_
PDB info PDB header:protein bindingChain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  INEPEQFWAEQARRIDWQTPFTQTLDHSNPPFARWFCEGRTNLCHNAIDRWLEKQPEALALIAVSSETEEERTFTFRQLH
Query Conservation     
  

                           
     
    

   
   

  


            

 

 
Alig confidence 

































.........
























............
Template Conservation     
   
  

   
        
  
  
   .........    
      
 



 
      ............
Template Sequence  ITDTSQALRDFARLLDDPDLTARTEALIAREEAK. . . . . . . . . VRAALEPWRARLEGKRVLLYTGGVK. . . . . . . . . . . .
Template Known Secondary structure  TT
.........TT

SSS
............
Template Predicted Secondary structure 




.........






............
Template SS confidence 















































































   277..280.........290.........300.........310 .........320.........330.....
 
   91........100.........110.........120.........130.........140.........150.........160.........170
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  DEVNAVASMLRSLGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIVSADAGARGGK
Query Conservation    
  

  
   

  

 
 
      
  
  

    

  


        
   
       

          
Alig confidence  ..













...































..


























Template Conservation  ..   

  
 


  ...
  
                      
    
..       
    





       
 
Template Sequence  . . SWSVVSALQDLGMK. . . VVATGTKKSTEEDKARIRELMGDDVKMLDEGN. . ARVLLKTVDEYQADILIAGGRNMYTAL
Template Known Secondary structure  ..
T
...
BSSS
S
SS

B

S
S..TT
S

GGG
Template Predicted Secondary structure  ..


...











..





Template SS confidence 















































































   336...340......... 350.........360.........370.........380. ........390.........400........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions