Job Description P77495 Confidence 100.00% Date Thu Jan 5 12:29:54 GMT 2012 Rank 14 Aligned Residues 533 % Identity 18% Template c2d1tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:luciferin 4-monooxygenase; PDBTitle: crystal structure of the thermostable japanese firefly2 luciferase red-color emission s286n mutant complexed with3 high-energy intermediate analogue Resolution 1.45 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	S	N	P	P	F	A	R	W	F	C	E	G	R	T	N	L	C	H	N	A	I	D	R	W	L	E	K	Q	P	E	A	L	A	L	I	A	V	S	S	E	T	E	E	E	R	T	F	T	F	R	Q	L	H	D	E	V	N	A	V	A	S	M	L	R	S	L	G	V	Q	R	G	D	R	V	L	V	Y	M
Query Conservation
Alig confidence																																											.	.																.
Template Conservation																																											.	.																.
Template Sequence		D	E	N	I	V	V	G	P	K	P	F	Y	P	I	E	E	G	S	A	G	T	Q	L	R	K	Y	M	E	R	Y	A	K	L	G	A	I	A	F	T	N	A	.	.	V	T	G	V	D	Y	S	Y	A	E	Y	L	E	K	S	.	C	L	G	K	A	L	Q	N	Y	G	L	V	V	D	G	R	I	A	L	C	S
Template Known Secondary structure			T	T	S							S	S				S	S																	T							T	.	.	T	T														.										T			T	T
Template Predicted Secondary structure																																											.	.																.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	I	A	E	A	H	I	T	L	L	A	C	A	R	I	G	A	I	H	S	V	V	F	G	G	F	A	S	H	S	V	A	A	R	I	D	D	A	K	P	V	L	I	V	S	A	D	A	G	A	R	G	G	K	I	I	P	Y	K	K	L	L	D	D	A	I	S	Q	A	Q	H	Q	P	R	H	V	L	L	V
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	C	E	E	F	F	I	P	V	I	A	G	L	F	I	G	V	G	V	A	P	T	N	E	I	Y	T	L	R	E	L	V	H	S	L	G	I	S	K	P	T	I	V	F	S	S	.	.	.	.	.	.	.	.	.	K	K	G	L	D	K	V	I	T	V	Q	K	T	V	T	T	I	K	T	I	V	I	L	D
Template Known Secondary structure		S	S		T	T	T											T								T	T	S															S						.	.	.	.	.	.	.	.	.	T	T	T											S	T	T							T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		D	R	G	L	A	K	M	A	R	V	S	G	R	D	V	D	F	A	S	L	R	H	Q	H	I	G	A	R	V	P	V	A	W	L	E	S	N	E	T	S	C	I	L	Y	T	S	G	T	T	G	K	P	K	G	V	Q	R	D	V	G	G	Y	A	V	A	L	A	T	S	M	.	.	D	T	I	F	G	G	K	A
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		S	K	V	D	Y	R	G	Y	Q	C	L	D	T	F	I	K	R	N	T	P	P	G	Y	Q	A	S	S	F	K	T	V	E	V	D	R	K	E	Q	V	A	L	I	M	N	S	S	G	S	T	G	L	P	K	G	V	Q	L	T	H	E	N	I	V	T	R	F	S	H	A	R	D	P	I	Y	G	N	Q	V	S	P
Template Known Secondary structure			S	S		B	T	T	B		B								T	S		T	T			G	G	G								T	T	T	S								S	S		S	S	S																			T		T	T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	V	F	F	C	A	S	D	I	G	W	V	V	G	H	S	Y	I	V	Y	A	P	L	L	A	G	M	A	T	I	V	Y	E	G	L	P	T	W	P	D	C	G	V	W	W	T	I	V	E	K	Y	Q	V	S	R	M	F	S	A	P	T	A	I	R	V	L	K	K	F	P	T	A	E	I	R	K	H	D	L
Query Conservation
Alig confidence																																	.	.	.	.	.																																				.	.
Template Conservation																																	.	.	.	.	.																																				.	.
Template Sequence		G	T	A	V	L	T	V	V	P	F	H	H	G	F	G	M	F	T	T	L	G	Y	L	I	C	G	F	R	V	V	M	.	.	.	.	.	L	T	K	F	D	E	E	T	F	L	K	T	L	Q	D	Y	K	C	T	N	V	I	L	V	P	T	L	F	A	I	L	N	K	S	E	.	.	L	L	N	K	Y	D	L
Template Known Secondary structure		T							S		T	T	S														T						.	.	.	.	.																T	T								G	G	G								S	.	.		G	G	G	S
Template Predicted Secondary structure																																	.	.	.	.	.																																				.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		S	S	L	E	V	L	Y	L	A	G	E	P	L	D	E	P	T	A	S	W	V	S	N	T	L	D	V	P	V	I	.	D	N	Y	W	Q	T	E	S	G	W	P	I	M	A	I	A	R	G	L	D	D	R	P	T	R	L	G	S	P	G	V	P	M	Y	G	Y	N	V	Q	L	L	N	E	V	T	G	E	P	C
Query Conservation																																.
Alig confidence																																.															.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		S	N	L	V	E	I	A	S	G	G	A	P	L	S	K	E	V	G	E	A	V	A	R	R	F	N	L	P	G	V	R	Q	G	Y	G	L	T	E	T	T	S	A	I	I	I	.	.	.	.	T	P	E	G	D	D	K	P	G	A	S	G	K	V	V	P	L	F	K	A	K	V	I	D	L	D	T	K	K	S	L
Template Known Secondary structure		T	T								S	S														T	T		S									G	G	G	S	S					.	.	.	.			T	T				T	T			B				T	T								T	T	T			B
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	N	E	K	G	M	L	V	V	E	G	P	L	P	P	G	C	I	Q	T	I	W	G	D	D	G	R	F	V	K	T	Y	W	S	L	F	S	R	P	V	Y	A	T	F	D	W	G	I	R	D	A	D	G	Y	H	F	I	L	G	R	T	D	D	V	I	N	V	A	G	H	R	L	G	T	R	E	I	E	E
Query Conservation
Alig confidence																.	.	.																	.	.	.
Template Conservation																.	.	.																	.	.	.
Template Sequence		G	P	N	R	R	G	E	V	C	V	K	G	P	M	.	.	.	L	M	K	G	Y	V	N	N	P	E	A	T	K	E	L	I	.	.	.	D	E	E	G	W	L	H	T	G	D	I	G	Y	Y	D	E	E	K	H	F	F	I	V	D	R	L	K	S	L	I	K	Y	K	G	Y	Q	V	P	P	A	E	L	E	S
Template Known Secondary structure			T	T									S	T	T	.	.	.	S		S			T	T									B	.	.	.		T	T	S												T	T									G	G	G		B		B	T	T			B
Template Predicted Secondary structure																.	.	.																	.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.				.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.				.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.		.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		S	I	S	S	H	P	G	V	A	E	V	A	V	V	G	V	K	D	A	L	K	G	Q	V	A	V	A	F	V	I	P	K	E	S	D	S	L	E	D	R	D	V	A	H	S	Q	E	K	A	I	M	A	L	V	D	S	Q	I	G	N	F	.	G	R	P	A	H	V	W	F	V	S	Q	L	P	K	T	R	S	G
Query Conservation																																																															.
Alig confidence																																								.	.	.	.	.	.	.	.																.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence		V	L	L	Q	H	P	S	I	F	D	A	G	V	A	G	V	P	D	P	V	A	G	E	L	P	G	A	V	V	V	L	E	S	G	K	N	M	T	.	.	.	.	.	.	.	.	E	K	E	V	M	D	Y	V	A	S	Q	V	S	N	A	K	R	L	R	G	G	V	R	F	V	D	E	V	P	K	G	L	T	G
Template Known Secondary structure					T	S	T	T												T	T	T												T	T					.	.	.	.	.	.	.	.										T	T	S		G	G	G	S		T	T						S	S			B		T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.									.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		592	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	L	R	R	T	I	Q	A	I	C	E	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	D	G	R	A	I	R	E	I	L	K	K	P
Template Known Secondary structure			B											S
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.