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Job DescriptionP77493
Confidence100.00%DateThu Jan 5 12:29:52 GMT 2012
Rank12Aligned Residues296
% Identity25%Templated1v19a_
SCOP infoRibokinase-like Ribokinase-like Ribokinase-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
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Template Sequence  ML. . EVVTAGEPLVALVP. . . . . . QEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAE
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Query Sequence  NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNS. PLLDGKALTEIFTQ
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Template Sequence  GVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEE
Template Known Secondary structure  T
B
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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
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Query Sequence  AKARQMIICADMIKPRLN. . . . ETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFI
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Template Sequence  AKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRVE. . . . . EALRALSAPEVVLKRGAKGAWA
Template Known Secondary structure  TTT




TTT

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   153......160.........170.........180.........190.........200..... ....210.........220.......
 
   236...240.........250.........260.........270.........280.........290.........300.........310
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Query Sequence  KRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLL
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Template Sequence  FVDGRRVEGSAFAV. EAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYREDLEVLL
Template Known Secondary structure  TT





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   228.230.........240. ........250.........260.........270.........280.........290.........300.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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