Job Description P77493 Confidence 97.77% Date Thu Jan 5 12:29:52 GMT 2012 Rank 65 Aligned Residues 126 % Identity 19% Template c3k5wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of a carbohydrate kinase (yjef family)from2 helicobacter pylori Resolution 2.60 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		E	A	L	S	Y	V	D	Y	L	F	P	N	F	A	E	A	K	L	L	T	G	.	.	.	.	.	.	.	.	.	K	E	T	L	D	E	I	A	D	C	F	L	A	C	G	V	K	T	V	V	I	K	T	G	K	D	G	C	F	I	K	R	G	D	M	T	M	K	V	P	A	V	A	G	I	T	A	I	D	T
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																										.																				.	.
Template Conservation																																																									.																				.	.
Template Sequence		Q	A	L	E	K	E	A	V	L	T	P	H	P	K	E	F	L	S	L	L	N	L	V	G	I	N	I	S	X	L	E	L	L	D	N	K	L	A	R	D	F	S	Q	K	Y	P	K	V	V	L	L	L	K	G	A	.	N	T	L	I	A	H	Q	G	Q	V	F	I	N	I	L	G	S	V	A	.	.	L	A	K
Template Known Secondary structure		T	T	T	T	S	S																	T	S					T	T	S	G	G	G	S											T	T							S	S	.	S						T	T										G	G	.	.	G		S
Template Predicted Secondary structure																																																									.																				.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	G	D	N	F	A	S	G	F	I	A	A	L	L	E	G	K	N	L	R	E	C	A	R	F	A	N	A	T	A	A	I	S	V	L	S	V	G	A	T	T	G	V	K	N	R	K	L	V	E	Q	L	L	E	E	Y	E
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		A	G	S	G	D	V	L	A	G	L	I	L	S	L	L	S	Q	N	Y	T	P	L	D	A	A	I	N	A	S	L	A	H	A	L	A	S	L	E	F	K	N	N	Y	A	L	.	T	P	L	D	L	I	E	K	I	K	Q	L	E
Template Known Secondary structure		T	T															T	T																	G	G	G	G		S	S	T	T			.											T
Template Predicted Secondary structure																																															.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions