Return to main results Retrieve Phyre Job Id

Job DescriptionP77493
Confidence100.00%DateThu Jan 5 12:29:52 GMT 2012
Rank2Aligned Residues304
% Identity20%Templatec3iq0B_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative ribokinase ii; PDBTitle: crystal structure of a putative ribokinase ii in complex2 with atp and mg+2 from e.coli
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
Query Conservation 
    

 

   

                         

   
 
  

 

  
  
  

 
  
      
   
Alig confidence 

..



























....











































Template Conservation 
 .. 
  

   

                 ....    

   
 
  
  

    

  

 
  
  
   
   
Template Sequence  LS. . KVFTIGEILVEIXASKIGQPFDQPGIWN. . . . GPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAAD
Template Known Secondary structure 

..S

SSTT

SSS


....
TT

SST
Template Predicted Secondary structure 

..
















....










Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions