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Job DescriptionP77493
Confidence100.00%DateThu Jan 5 12:29:52 GMT 2012
Rank36Aligned Residues287
% Identity19%Templatec3b3lC_
PDB info PDB header:transferaseChain: C: PDB Molecule:ketohexokinase; PDBTitle: crystal structures of alternatively-spliced isoforms of human2 ketohexokinase
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  NLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENI
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Template Sequence  EKQILCVGLVVLDVISL. VDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGV
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   3......10......... 20.........30.........40.........50.........60.........70.........80.
 
   83......90.........100.........110.........120.........130.........140..... ....150.........160
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Query Sequence  DIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNS. . PLLDGKALTEIFTQA
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Template Sequence  DVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQP
Template Known Secondary structure  B
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   161........170.........180.........190.........200.........210.........220 .........230....... .
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Query Sequence  KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACG. VKTVVIKTGKDGCFIKR. G
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Template Sequence  PEQKIRVSVEVEKPR. . . . . EELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPD
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   162.......170...... ...180.........190.........200.........210.........220.........230......
 
   239240.........250.........260.........270.........280.........290.....
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Query Sequence  DMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVG
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Template Sequence  GKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQG
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   237..240.........250.........260.........270.........280.........290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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