Job Description P07021 Confidence 100.00% Date Thu Jan 5 11:00:04 GMT 2012 Rank 3 Aligned Residues 118 % Identity 38% Template c3td4D_ PDB info PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate Resolution 1.79 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	A	G	D	W	S	L	G	L	S	D	A	I	L	F	A	K	N	D	Y	K	L	L	P	E	S	Q	Q	Q	I	Q	T	M	A	A	K	L	A	S	T	G	L	T	H	A	R	M	D	G	H	T	D	N	Y	G	E	D	S	Y	N	E	G	L	S	L	K	R	A	N	V	V	A	D	A	W	A	M	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	M	E	L	T	E	D	L	N	M	E	L	R	V	F	F	D	T	N	K	S	N	I	K	D	Q	Y	K	P	E	I	A	K	V	A	E	K	L	S	E	Y	P	N	A	T	A	R	I	E	G	H	T	D	N	T	G	P	R	K	L	N	E	R	L	S	L	A	R	A	N	S	V	K	S	A	L	V	N	E	Y
Template Known Secondary structure																			T	T						G	G	G														S	T	T											S		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	P	R	S	N	L	T	T	Q	G	L	G	K	K	Y	P	I	A	S	N	K	T	A	Q	G	R	A	E	N	R	R	V	A	V	V	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	D	A	S	R	L	S	T	Q	G	F	A	W	D	Q	P	I	A	D	N	K	T	K	E	G	R	A	M	N	R	R	V	F	A	T	I	T
Template Known Secondary structure					G	G	G							T	T	S	S		S	S		T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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