 |
Job Description | P07021 | Confidence | 4.00% | Date | Thu Jan 5 11:00:04 GMT 2012 |
Rank | 77 | Aligned Residues | 80 |
% Identity | 16% | Template | c3a9lB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:poly-gamma-glutamate hydrolase; |
PDBTitle: structure of bacteriophage poly-gamma-glutamate hydrolase
|
Resolution | 1.90 Å |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | |
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
M | A | A | K | L | A | S | T | G | L | T | H | A | R | M | D | G | H | T | D | N | Y | G | E | D | S | Y | N | E | G | L | S | L | K | R | A | N | V | V | A | D | A | W | A | M | G | G | Q | I | P | R | S | N | L | T | T | Q | G | L | G | K | K | Y | P | I | A | S | N | K | T | A | Q | G | R | A | E | N | R | . |
R |
Query Conservation |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
| . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |
|
|
|
|
|   |   |   |
|   |
|
Template Sequence |   |
M | A | V | C | M | L | S | K | H | T | D | A | V | S | F | H | G | Y | K | D | D | Y | N | K | N | T | L | V | G | G | L | N | T | E | L | R | N | L | I | V | S | K | L | N | S | K | G | . |
. |
. |
. |
. |
. |
I | A | A | E | V | A | T | D | R | F | T | A | T | D | P | D | N | I | V | N | R | C | A | S | G | K | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |
|
| S | S |
|
|
|  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . |
|
|
|  |  |
|
| S | S |
|
|
|
|
| T | T | S | G | G | G | G | S | T | T | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
153 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
V | A | V | V | I | T | T |
Query Conservation |   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
Template Sequence |   |
V | Q | L | E | I | S | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|