 |
Job Description | P62620 | Confidence | 74.98% | Date | Thu Jan 5 12:07:43 GMT 2012 |
Rank | 307 | Aligned Residues | 84 |
% Identity | 18% | Template | d1z41a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 1.30 |
|
 |
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | . | |
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
D | V | E | A | T | V | N | Q | I | K | A | L | E | R | V | G | A | D | I | V | R | V | S | V | P | T | M | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | E | A | F | K | L | I | K | Q | Q | V | N | V | P | L | V | A | D | I | H | F | . |
D | Y | R | I | A | L | K | V | A | E | Y | G | . |
V | D | C | L | R | I |
Query Conservation |   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
| . |   |   |   |   |
|   |   |
|   |   |   |
| . |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |   |
Template Sequence |   |
D | I | A | D | H | I | G | F | A | K | W | X | K | E | Q | G | V | D | L | I | D | C | S | S | G | A | L | V | H | A | D | I | N | V | F | P | G | Y | Q | V | S | F | A | E | K | I | R | E | Q | A | D | X | A | T | G | A | V | G | X | I | T | D | G | S | X | A | E | E | I | L | Q | N | G | R | A | D | L | I | F | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|
| S | S |
|
|
|
|
|
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
  |
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | G | N | I | G | N | E | E | R | I | R | M | V | V | D |
Query Conservation |   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|
|
|   |   |
|   |   |   |
Template Sequence |   |
G | R | E | L | L | R | D | P | F | F | A | R | T | A | A | K |
Template Known Secondary structure |   |
|  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|