Return to main results Retrieve Phyre Job Id

Job DescriptionP62620
Confidence85.71%DateThu Jan 5 12:07:43 GMT 2012
Rank249Aligned Residues117
% Identity15%Templated1tqxa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.. ...... .70......... 80.........90. .....
Predicted Secondary structure 








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Query Sequence  PIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVS. . . . . . VPTMDA. AEAFKLIKQQV. NVPLVADIHFDY. . RIALK
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Template Conservation   

 


 
 
   
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Template Sequence  AIIAPSVLASNISKLA. . . EETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPL
Template Known Secondary structure 
BGGGS
GGG...TT
SBSSSSS
B


GGG
SS
SS
GGGGGGG
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   6...10.........20. ........30.........40.........50.........60.........70.........80..
 
   97..100.........110.........120.........130.........140.......
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Query Sequence  VAEYGVDCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQE
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Template Sequence  LKTSNQLTFHFEALN. EDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVP
Template Known Secondary structure 
TTSSGGGGT.T
TTT

TTS
GGGG
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   83......90....... ..100.........110.........120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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