 |
Job Description | P62620 | Confidence | 76.63% | Date | Thu Jan 5 12:07:43 GMT 2012 |
Rank | 302 | Aligned Residues | 72 |
% Identity | 19% | Template | d1qapa1 |
SCOP info | TIM beta/alpha-barrel
| Nicotinate/Quinolinate PRTase C-terminal domain-like
| NadC C-terminal domain-like
|
Resolution | 2.80 |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | G | A | P | I | A | V | Q | S | M | T | N | T | R | T | T | D | V | E | A | T | V | N | Q | I | K | A | L | E | R | V | G | A | D | I | V | R | V | S | V | P | T | M | D | A | A | E | A | F | K | L | I | K | Q | Q | V | N | V | P | L | V | A | D | I | H | F | D | Y | R | I | A | L | K | V | A | E | Y | G | V |
Query Conservation |   |
|
|   |   |
|
|   |
|
|
|
|   |   |
|   |
|   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|
|
|   |
| . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|
Template Sequence |   |
H | P | D | V | P | V | E | V | E | V | E | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | E | L | D | D | A | L | K | A | G | A | D | I | I | M | L | D | N | F | N | T | D | Q | M | R | E | A | V | K | R | V | N | G | . |
Q | A | R | L | E | V | S | G | N | V | T | A | E | T | L | R | E | F | A | E | T | G | V |
Template Known Secondary structure |   |
S | T | T | S |
|  |  |  |  |  | S | S | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
| T | . | T |
|
|  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
. | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
  |
  |   |
103 | . | . |
Predicted Secondary structure |   |
|  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
D | C | L |
Query Conservation |   |
|
|
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |
|
Template Sequence |   |
D | F | I |
Template Known Secondary structure |   |
S |  |  |
Template Predicted Secondary structure |   |
|  |  |
Template SS confidence |   |
|
|
|
  |   |
275 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|