 |
Job Description | P62620 | Confidence | 54.29% | Date | Thu Jan 5 12:07:43 GMT 2012 |
Rank | 389 | Aligned Residues | 85 |
% Identity | 21% | Template | d1jvna1 |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Histidine biosynthesis enzymes
|
Resolution | 2.10 |
|
 |
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
. | . | 60 | . | . | |
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | N | Q | I | K | A | L | E | R | V | G | A | D | . |
. |
. |
I | V | R | V | S | . |
. |
. |
V | P | T | M | D | A | A | E | A | F | K | L | I | K | Q | Q | V | N | V | P | L | V | A | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | H | F | D | Y | R | I | A | L | K | V | A | E | Y | G | V | D | C | L | R |
Query Conservation |   |
|   |
|
|   |   |
|   |   |   |
|   |
| . | . | . |
|
|
|
|   | . | . | . |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
Template Sequence |   |
V | Q | L | A | Q | K | Y | Y | Q | Q | G | A | D | E | V | T | F | L | N | I | T | D | C | P | L | K | D | T | P | M | L | E | V | L | K | Q | A | A | K | T | V | F | V | P | L | T | V | G | G | G | I | K | D | I | V | D | V | D | G | T | K | I | P | A | L | E | V | A | S | L | Y | F | R | S | G | A | D | K | V | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |
|
|
|
| G | G | G |
|  |  |  |  |  |  |  |  |  | T | T | T |
|
| S |
|  |  |  |  | S | S |
| S |
|  |  |
| T | T |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . |
  |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | P | G | N | I | G | N | E | E | R | I | R | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | D | C | A | R | D | K | N |
Query Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
I | G | T | D | A | V | Y | A | A | E | K | Y | Y | E | L | G | N | R | G | D | G | T | S | P | I | E | T | I | S | K | A | Y | G |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| S |
| S |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
363 | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|