Job Description P62620 Confidence 50.74% Date Thu Jan 5 12:07:43 GMT 2012 Rank 401 Aligned Residues 210 % Identity 13% Template d16pka_ SCOP info Phosphoglycerate kinase Phosphoglycerate kinase Phosphoglycerate kinase Resolution 1.60

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																													.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	E	A	F	K	L	I	K
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		N	V	P	V	K	.	.	N	G	K	I	T	N	D	Y	R	I	R	S	A	L	P	T	L	K	K	V	L	T	E	G	G	S	C	V	L	M	S	H	L	G	R	P	K	G	I	P	M	A	Q	A	G	K	I	R	S	T	G	G	V	P	G	F	Q	Q	K	A	T	L	K	P	V	A	K	R	L	S	E	L	L
Template Known Secondary structure							.	.	T	T			S																		T	T										S					B		G	G	G							T	T			T	T			G	G	G		S
Template Predicted Secondary structure							.	.
Template SS confidence
		26	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.										.																																				.	.	.	.	.	.
Query SS confidence																											.	.	.	.										.																																				.	.	.	.	.	.
Query Sequence		Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	.	.	.	.	V	D	C	L	R	I	N	P	G	.	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	.	.	.	.	.	.
Query Conservation																											.	.	.	.										.																																				.	.	.	.	.	.
Alig confidence		.											.														.	.	.	.										.																						.	.													.	.	.	.	.	.
Template Conservation		.											.																																																	.	.
Template Sequence		.	L	R	P	V	T	F	A	P	D	C	.	L	N	A	A	D	V	V	S	K	M	S	P	G	D	V	V	L	L	E	N	V	R	F	Y	K	E	E	G	S	K	K	A	K	D	R	E	A	M	A	K	I	L	A	S	Y	G	D	V	.	.	Y	I	S	D	A	F	G	T	A	H	R	D	S	A	T	M	T	G
Template Known Secondary structure		.	T	S						S		T	.	T	S							T			T	T								G	G	G	B	G	G	G	G		S	S													T	T		S		.	.						G	G	G	T	T	S			T	T	T	T
Template Predicted Secondary structure		.											.																																																	.	.
Template SS confidence
			104	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		Q	E	K	Y	G	E	P	.	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L
Query Conservation									.
Alig confidence									.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	K	I	L	G	N	G	A	A	G	Y	L	M	E	K	E	I	S	Y	F	A	K	V	L	G	N	P	P	R	P	L	V	A	I	V	G	G	A	K	V	S	D	K	I	Q	L	L	D	N	M	L	Q	R	I	D	Y	L	L	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M
Template Known Secondary structure							T																				S				S	S							S	S		S	G	G	G								G	G	G		S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		A	Y	T	F	L	K	A	Q	G	Y	S	I	G	K	S	K	C	E	.	.	E	S	K	L	E	F	A	R	S	L	L	K	K	A
Template Known Secondary structure										T				T	T					.	.	G	G	G
Template Predicted Secondary structure																				.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions