Job Description P62620 Confidence 97.76% Date Thu Jan 5 12:07:43 GMT 2012 Rank 41 Aligned Residues 146 % Identity 13% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	.	.	.	V	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D
Query Conservation																																																	.	.	.
Alig confidence																					.																												.	.	.																												.
Template Conservation																					.																																																										.
Template Sequence		S	M	K	L	Y	D	F	E	V	G	L	D	Q	P	F	F	L	I	A	.	G	T	C	V	V	E	S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	N	V	P	F	I	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	T	D	V	.	H	S
Template Known Secondary structure						T	T				S	T	T	S							.			S	S																					T	T																								T								.		S
Template Predicted Secondary structure																					.																																																										.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R
Query Conservation
Alig confidence												.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	E	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A	F	L	C	R	Q	.	.	.	.	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E
Template Known Secondary structure										T	T	.		S						G	G	G	T	T		.	.	.	.									T	T	S	S								T	T	.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G
Template Predicted Secondary structure												.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.													.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		171	.	.			.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		L	N	F	.	.	D	Q	F	K	V
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		A	G	L	S	E	D	R	F	M	A
Template Known Secondary structure		T	T			S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions