Job Description P62620 Confidence 96.13% Date Thu Jan 5 12:07:43 GMT 2012 Rank 82 Aligned Residues 138 % Identity 16% Template c3sz8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei Resolution 2.05 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.	.	.																													.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Query SS confidence																.	.	.																													.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Query Sequence		N	V	P	I	G	D	G	A	P	I	A	V	Q	S	.	.	.	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	.	.	.	.	.	.	.	.	V	S	V	P	T	.	.	.	.	.	.	.	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N
Query Conservation																.	.	.																													.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Alig confidence																.	.	.																													.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	T	A	G	N	S	L	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	F	T	L	D	V	C	G	E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	V	G	L	D	E	G	L	K	I	F	A	E	V	K	A	R	F	G
Template Known Secondary structure		T					T	T	S																																T									S			T	T		S	S	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S
Query Conservation
Alig confidence									.													.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.													.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	V	I	T	D	V	.	H	E	A	E	Q	A	A	P	V	A	E	I	.	A	D	V	L	Q	V	P	A	F	L	A	R	Q	T	D	.	.	.	.	L	V	V	A	I	A	K	A	G	K	P	V	N	V	K	K	P	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	M	S	P	T	Q	L	K	H	V
Template Known Secondary structure									.		S	G	G	G								.		S						G	G	G	T	T				.	.	.	.								T		S								T	T	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S
Template Predicted Secondary structure									.													.																.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		V	S	K	.	.	.	.	C	G	E	V	G	N	D	R	V	M	L
Template Known Secondary structure					.	.	.	.				T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		150	.	.					.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions