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Job DescriptionP62620
Confidence96.13%DateThu Jan 5 12:07:43 GMT 2012
Rank81Aligned Residues142
% Identity13%Templatec3stgA_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.. .......40 .........50.........60. .... ....70......
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Query Sequence  RIYVGNVPIGDGAPIAVQS. MTNTRTTD. . VEATVNQIKALERVGADIVRV. . . . . . . SVPT. . . . . . . MDAAEAFKLIK
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Template Sequence  DIKINDITLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKPRSSIHSYRGVGLEEGLKIFEKVK
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   77..80.........90.........100.........110.........120.........130....... ..140.........150.....
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Query Sequence  QQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVN. AGSLEKDLQEKYGEPTPQ
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Template Sequence  AEFGIPVITDV. HEPHQCQPVAEV. CDVIQLPAFLARQ. . . . TDLVVAMAKTGNVVNIKKPQFLSPSQMKNI. . . . . . . .
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   82.......90.. .......100.... .....110....... ..120.........130.........140.......
 
   156...160.........170........
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Query Sequence  ALLESAMRHVDHLDRLNFDQFKV
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Template Sequence  . . . . . . . . . VEKFHEAGNGKLIL
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   148.150.........160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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