 |
Job Description | P62620 | Confidence | 96.69% | Date | Thu Jan 5 12:07:43 GMT 2012 |
Rank | 58 | Aligned Residues | 110 |
% Identity | 17% | Template | c3q58A_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase; |
PDBTitle: structure of n-acetylmannosamine-6-phosphate epimerase from salmonella2 enterica
|
Resolution | 1.80 Å |
|
 |
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
D | G | A | P | I | A | V | Q | S | M | T | N | T | R | T | T | D | V | E | A | T | V | N | Q | I | K | A | L | E | R | V | G | A | D | I | V | R | V | S | V | P | T | M | D | A | A | E | A | F | K | L | I | K | Q | Q | V | N | V | P | L | V | A | D | I | H | F | D | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R |
Query Conservation |   |
|   |   |
|
|   |
|
|
|
|   |   |
|   |
|   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
G | G | L | I | V | S | C | Q | P | V | P | G | S | P | X | D | K | P | E | I | V | A | A | X | A | Q | A | A | A | S | A | G | A | V | A | V | R | I | E | G | I | . |
. |
. |
. |
. |
E | N | L | R | T | V | R | P | H | L | S | V | P | I | I | G | I | I | K | R | D | L | T | G | S | P | V | R | I | T | P | Y | L | Q |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
|
|
| T | T | S | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |  | . | . | . | . | . |  |  |  |  |  |  | G | G | G |
|
| S |
|  |  |  |  |
| B |
|
|
| S | S |
|
|
|
| B | S |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | L | K | V | A | E | Y | G | V | D | C | L | R | I | N | P | G | N | I | G | N | E | E | R | I | R | M | V | V | D | C | A | R | D | K | N | I | P | I | R | I | G | V | N | A |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
Template Sequence |   |
D | V | D | A | L | A | Q | A | G | A | D | I | I | A | F | D | A | S | F | R | S | R | P | V | D | I | D | S | L | L | T | R | I | R | L | H | G | L | L | A | X | A | D | C | S | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
| S | S |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|