Job Description P62620 Confidence 98.41% Date Thu Jan 5 12:07:43 GMT 2012 Rank 35 Aligned Residues 199 % Identity 20% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		R	R	K	S	T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	.	.	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D
Query Conservation																																																								.	.
Alig confidence																												.		.	.																									.	.
Template Conservation																												.		.	.
Template Sequence		H	P	E	D	T	V	I	D	L	G	D	V	K	I	G	N	G	Y	F	T	I	I	A	G	P	S	.	V	.	.	E	G	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	R	G	G	A	Y	K	L	G	E	K	G	L	E	Y	L	R	E	A	A	D	K	Y	G	M	Y	V	V	T	E
Template Known Secondary structure				S							S	S				S	T	T										.		.	.																T	T											.															T	T
Template Predicted Secondary structure																												.		.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D
Query Conservation
Alig confidence			.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation			.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		A	.	L	G	E	D	D	L	P	K	V	A	E	Y	.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	.	.	.	.	F	R	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	K	R	G	F	M	.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	E	E	F	L	L	S	A	E	Y	.	.	.
Template Known Secondary structure			.		S	G	G	G								.		S						G	G	G	T	T		.	.	.	.								G	G	G		S								T	T	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Predicted Secondary structure			.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		165		.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.													.	.	.	.	.	.	.	.	220	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		H	L	D	R	L	N	F	D	Q	F	K	V	S	V	.	.	.	.	.	.	.	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L	S	E	G	I
Query Conservation																.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	I	A	N	S	G	N	T	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	S	A	V	P	I	I	R	K	E	S	H	L	P	I	L	V	D	P	S	H	S	G	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I
Template Known Secondary structure		.				T	T											B			S		S	S	S	S	S	B			T	T									B	S	S						T	T	T	T	T			G	G	G												T		S
Template Predicted Secondary structure		.
Template SS confidence
			224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions