Job Description P62620 Confidence 47.89% Date Thu Jan 5 12:07:43 GMT 2012 Rank 416 Aligned Residues 162 % Identity 15% Template c3noeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa Resolution 2.95 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																														.	.	.	.	.	.	.															.	.	.												.
Query SS confidence																																														.	.	.	.	.	.	.															.	.	.												.
Query Sequence		I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	.	.	.	.	.	.	.	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	.	.	.	N	V	P	L	V	A	D	I	H	F	D	.
Query Conservation																																														.	.	.	.	.	.	.															.	.	.												.
Alig confidence																																														.	.	.	.	.	.	.															.	.	.												.
Template Conservation
Template Sequence		I	A	G	S	M	V	A	L	V	T	P	F	D	A	Q	G	R	L	D	W	D	S	L	A	K	L	V	D	F	H	L	Q	D	G	T	N	A	I	V	A	V	G	T	T	G	E	S	A	T	L	D	V	E	E	H	I	Q	V	V	R	R	V	V	D	Q	V	K	G	R	I	P	V	I	A	G	T	G	A	N	S
Template Known Secondary structure													B		T	T	S		B																T		S					S	S	T	T	T	T	G	G	G																		T	T	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
						91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	.	.	.	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R
Query Conservation		.	.	.	.																								.	.	.
Alig confidence		.	.	.	.																								.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	E	A	V	A	L	T	E	A	A	K	S	G	G	A	D	A	C	L	L	V	T	P	Y	Y	N	K	P	T	Q	E	G	M	Y	Q	H	F	R	H	I	A	E	A	V	A	I	P	Q	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	V	P	G	R	T	S	C	D	M	L	P	E	T
Template Known Secondary structure														T	T	T		S									S	S																		S		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.															.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		V	E	R	L	S	K	V	P	N	I	I	G	I	K	E	A	.	.	T	G	D	L	Q	R	A	K	E	V	I	E	R	V	G	K	D	F
Template Known Secondary structure							T	S	T	T								.	.	S													S		T	T	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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