Job Description P62620 Confidence 94.80% Date Thu Jan 5 12:07:43 GMT 2012 Rank 142 Aligned Residues 219 % Identity 14% Template c3lotC_ PDB info PDB header:structure genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function (np_070038.1) from2 archaeoglobus fulgidus at 1.89 a resolution Resolution 1.89 Å

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		25	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.											.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure														.	.					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	P	I	A	V	Q	S	M	T	N	T	.	.	R	T	T	D	.	.	.	.	.	.	.	.	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	.	.	.	.	.	.	.	.	.	.	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V
Query Conservation														.	.					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	V	V	I	V	T	C	A	I	T	G	A	I	H	T	P	S	X	S	P	Y	L	P	V	T	P	D	Q	I	V	E	E	A	V	K	A	A	E	A	G	A	G	X	V	H	I	H	A	R	D	P	K	D	G	R	P	T	T	D	V	E	V	F	R	Y	I	C	R	E	I	K	K	Q	S	D	V	V	I	N
Template Known Secondary structure												S		S	S	S		G	G	G		T	T	S			S														T	T		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		85	.	.							.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110			.	.	.																															.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.												.													.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.												.													.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	I	.	.	.	.	.	.	H	F	D	Y	R	I	A	L	K	V	A	.	E	Y	G	V	D	C	L	R	I	N	P	G	.	.	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	E	R	I	R	M	V	V	D	C	A
Query Conservation					.	.	.	.	.	.												.													.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.												.													.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	T	G	G	G	G	T	L	G	I	P	V	E	E	R	A	K	V	V	P	A	L	K	P	E	I	A	T	F	N	X	G	S	X	N	F	A	I	H	P	L	L	K	K	Y	K	E	F	K	Y	D	W	E	P	E	Y	L	E	X	T	R	D	I	V	F	R	N	T	F	K	D	L	E	A	L	S	R	I	F
Template Known Secondary structure				S	S	T	T	G	G	G	T							T	T								S														G	G	G	G	G	T					S	S	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.														.	.	.	.
Query SS confidence																																											.	.														.	.	.	.
Query Sequence		R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	.	.	H	L	D	R	L	N	F	D	Q	F	K	V	S	.	.	.	.	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I
Query Conservation																																											.	.														.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.												.	.														.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template Sequence		K	E	N	D	T	K	P	E	L	E	C	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	I	.	.	.	.	G	Q	I	Y	N	T	A	F	X	F	H	E	G	Y	L	E	P	P	L	R	L	Q	F	I	H	G	I	L	G	G	I	G	T	A	V	E	D	V	L	F	X	K	Q	T	A	D	R	L	I	G
Template Known Secondary structure				T	T								.	.	.	.	.	.	.	.	.	.	.	.	S	S		.	.	.	.												T	T	S	S		S	S										T	T	S																			T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.													.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.						.
Query SS confidence																																													.	.						.
Query Sequence		D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	A	.	.	D	P	V	E	E	.	I	K	V	G	F	D	I	L	K	S	L	R
Query Conservation																																													.	.						.
Alig confidence																																													.	.						.
Template Conservation
Template Sequence		R	E	N	Y	T	W	S	L	V	G	A	G	R	F	Q	X	P	L	G	T	L	A	V	I	X	G	G	D	V	R	V	G	L	E	D	S	L	Y	I	E	R	G	K	L	A	K	S	N	A	E	Q	V	E	K	X	V	R	I	V	K	E	L	G
Template Known Secondary structure		G	G	G									G	G	G												T						S	T	T	T		S				T	T				S																T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions