Job Description P62620 Confidence 83.70% Date Thu Jan 5 12:07:43 GMT 2012 Rank 268 Aligned Residues 185 % Identity 14% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.																							.	.	.	.	.	.
Query SS confidence																																													.	.																							.	.	.	.	.	.
Query Sequence		A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	.	.	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	.	.	.	.	.	.	Y	R	I	A	L	K	V
Query Conservation																																													.	.																							.	.	.	.	.	.
Alig confidence											.	.											.																						.	.											.												.	.	.	.	.	.
Template Conservation											.	.											.																																		.
Template Sequence		N	D	P	K	V	I	V	A	L	.	.	D	Y	D	N	L	A	D	A	L	A	.	F	V	D	K	I	D	P	S	T	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	D	F	V	R	E	L	H	K	R	.	G	F	S	V	F	L	D	L	K	F	H	D	I	P	N	T	C	S	K	A	V	K	A	A
Template Known Secondary structure											.	.			S								.			T	T	S		T	T	S																								T	.	T											S
Template Predicted Secondary structure											.	.											.																																		.
Template SS confidence
		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	.	.	.	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D
Query Conservation																																				.	.	.
Alig confidence																.	.																			.	.	.																								.	.
Template Conservation																.	.																																													.	.
Template Sequence		A	E	L	G	V	W	M	V	N	V	H	A	S	G	.	.	G	E	R	M	M	A	A	S	R	E	I	L	E	P	Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S	M	E	S	A	D	L	Q	G	I	G	I	L	S	A	.	.	P	Q	D	H	V	L	R	L	A	T	L	T	K	N	A	G	L	D
Template Known Secondary structure					T		S						G	G	G	.	.													G	G	G	G	G	G	S								S		T	T									T	T			S		.	.															T	T
Template Predicted Secondary structure																.	.																																													.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L	G
Query Conservation
Alig confidence										.	.	.	.	.	.																					.
Template Conservation										.	.	.	.	.	.																					.
Template Sequence		G	V	V	C	S	A	Q	E	.	.	.	.	.	.	A	S	L	L	K	Q	H	L	G	R	E	F	K	L	V	T	P	G	I	R	.	P	A	Q	R	R	I	M	T	P	A	Q	A	I	A	S	G
Template Known Secondary structure							T	T	T	.	.	.	.	.	.										T	T	S									.				T	T	S										T
Template Predicted Secondary structure										.	.	.	.	.	.																					.
Template SS confidence
		154	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions