Job Description P62620 Confidence 97.41% Date Thu Jan 5 12:07:43 GMT 2012 Rank 47 Aligned Residues 182 % Identity 18% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.
Predicted Secondary structure																																																				.	.	.																		.	.	.	.	.
Query SS confidence																																																				.	.	.																		.	.	.	.	.
Query Sequence		T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	.	.	.	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	.	.	.	.	.	N	V	P	L	V
Query Conservation																																																				.	.	.																		.	.	.	.	.
Alig confidence																										.	.	.																								.	.	.																		.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		K	T	V	T	V	R	D	L	V	V	G	E	G	A	P	K	I	I	V	S	L	M	G	K	.	.	.	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	F	A	N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L
Template Known Secondary structure		T					T	T				T	S	S	S										S	.	.	.	S												T	T	S			S						G	G	G		T	T	T	T																		S	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		85	.	.	.	.	90													.		.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.		.											.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.		.											.
Query Sequence		A	D	I	H	F	D	.	.	.	.	.	.	.	.	.	.	.	.	Y	.	R	I	A	L	K	V	A	E	Y	G	.	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.		.											.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.		.											.											.	.																		.									.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.																		.									.	.	.	.	.	.	.	.	.
Template Sequence		F	T	F	R	S	A	K	E	G	G	E	Q	A	L	T	T	G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	.	.	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	.	A	V	I	M	S	N	H	D	.	.	.	.	.	.	.	.	.	F	H
Template Known Secondary structure							G	G	G	T		S	S																		S			S						G	G	G	.	.															T	T		.									.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																											.	.																		.									.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.										.	.
		151	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																																		.	.	.													.
Query SS confidence						.	.																																		.	.	.													.
Query Sequence		E	P	T	P	.	.	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	.	.	.	A	V	E	S	Y	R	L	L	A	K	Q	I	.	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V
Query Conservation						.	.																																		.	.	.													.
Alig confidence			.			.	.										.	.	.	.																					.	.	.													.					.					.	.	.
Template Conservation			.														.	.	.	.																																									.					.	.	.
Template Sequence		K	.	T	P	A	A	E	E	I	V	Q	R	L	R	K	.	.	.	.	M	Q	E	L	G	A	D	I	P	K	I	A	V	M	P	Q	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	.	I	T	M	S	.	.	.	M	S	K	T	G	V	I
Template Known Secondary structure			.														.	.	.	.				T	T		S									S	S																		T		S	S			.					.	.	.		T	G	G	G	T
Template Predicted Secondary structure			.														.	.	.	.																																									.					.	.	.
Template SS confidence
		147		.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.				.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions