Job Description P62620 Confidence 50.37% Date Thu Jan 5 12:07:43 GMT 2012 Rank 404 Aligned Residues 234 % Identity 14% Template c3l23A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution Resolution 1.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																					.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	.	.	.	.	.	R	V	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	E	I	G	L	Q	I	Y	S	L	S	Q	E	L	Y	K	G	D	V	A	A	N	L	R	K	V	K	D	X	G	Y	S	K	L	E	L	A	G	Y	G	K	G	A	I	G	G	V	P	X	X	D	F	K	K	X	A	E	D	A	G	L	K	I	I	S	S	H	V	N	P	V	D	T	S	I	S	D	P	F
Template Known Secondary structure									G	G	G	G	G	G	G	G	G	S	S												T	T											T	T			T	T													T	T											B		T	T		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
																					91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	.	.	.	.	.	.	.	.	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.																													.
Template Conservation																																																																																	.
Template Sequence		K	A	X	I	F	K	Y	S	K	E	V	T	P	K	I	X	E	Y	W	K	A	T	A	A	D	H	A	K	L	G	C	K	Y	L	I	Q	P	X	X	P	T	I	T	T	H	D	E	A	K	L	V	C	D	I	F	N	Q	A	S	D	V	I	K	A	E	G	I	A	T	G	F	G	Y	H	N	H	N	X	E	.
Template Known Secondary structure		T	T	B			S			T	T	T																		T	T		S						S						S																					T	T		T	T								S	G	G	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																										.												.
Query SS confidence																																																										.												.
Query Sequence		D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	.	D	Q	P	L	H	L	G	I	T	E	A	.	G	G	A	R	S	G	A	V	K	S	A
Query Conservation																																																										.												.
Alig confidence		.	.																																																							.												.
Template Conservation		.	.
Template Sequence		.	.	F	N	R	V	A	T	K	E	Q	Q	F	X	K	V	G	D	Q	I	Y	D	L	X	L	K	D	T	D	P	S	K	V	Y	F	E	X	D	V	Y	W	T	V	X	G	Q	N	D	P	V	E	Y	X	Q	K	H	P	D	R	I	K	V	L	H	I	K	D	R	A	V	F	G	Q	S	G	X	X	N	F	E
Template Known Secondary structure		.	.	G	S					T	T	T						S											S		T	T	T													T	T											T	T	T									S	S	S	T	T	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		I	G	L	G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	.	.	.	.	.	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I	R	S
Query Conservation																					.	.	.	.	.
Alig confidence																	.				.	.	.	.	.
Template Conservation																	.
Template Sequence		X	I	F	K	Q	X	Y	A	N	G	I	K	D	Y	F	.	V	E	L	E	Q	X	P	D	G	R	T	Q	F	A	G	V	K	D	C	A	D	Y	L	I	K	A	P	F	V	K
Template Known Secondary structure											T						.							T	T	S																		T	T
Template Predicted Secondary structure																	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions