Job Description P62620 Confidence 54.21% Date Thu Jan 5 12:07:43 GMT 2012 Rank 390 Aligned Residues 198 % Identity 12% Template c3kwsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution Resolution 1.68 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																				.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	.	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	A	L	K	V	A	E	Y	G	V	D	C	L
Query Conservation																				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	L	D	F	X	E	K	L	G	V	V	G	F	E	P	G	G	G	G	L	A	G	R	V	N	E	I	K	Q	A	L	N	G	R	N	I	K	V	S	A	I	C	A	G	F	K	G	F	I	L	S	T	D	P	A	I	R	K	E	C	X	D	T	X	K	E	I	I	A	A	A	G	E	L	G	S	T	G	V
Template Known Secondary structure										T	T							B	S	T	T													T	T	S	S												S		T	T	B	S	S																					T	T		S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.															.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	N	P	G	N	I	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.				.
Template Sequence		I	I	V	P	A	F	N	G	Q	V	P	A	L	P	H	T	X	E	T	R	D	F	L	C	E	Q	F	N	E	X	G	T	F	A	A	Q	H	G	T	S	V	I	F	E	P	.	.	.	.	.	.	.	.	.	.	.	.	L	N	R	.	K	E	C	F	Y	L	R	Q	V	A	D	A	A	S	L	C	R	D	I
Template Known Secondary structure					S			T	T			S	B			S	S																					T	T								.	.	.	.	.	.	.	.	.	.	.	.			T	.	T	T		S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.				.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.													.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.
Predicted Secondary structure																					.																						.	.	.	.	.																															.	.
Query SS confidence																					.																						.	.	.	.	.																															.	.
Query Sequence		N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	.	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	.	.	.	.	.	G	A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	.	.	A	D
Query Conservation																					.																						.	.	.	.	.																															.	.
Alig confidence																					.																						.	.	.	.	.																															.	.
Template Conservation
Template Sequence		N	N	P	G	V	R	C	X	G	D	F	W	H	X	T	W	E	E	T	S	D	X	G	A	F	I	S	G	G	E	Y	L	Q	H	V	H	V	A	S	R	K	R	R	S	X	P	G	E	D	G	D	A	D	N	Y	I	N	G	F	K	G	L	K	X	I	G	Y	N	N	Y	V	S	F	E	C	G	C	Q	G	D
Template Known Secondary structure				T	T															S										G	G	G									T	T	T	S	S	S	T	T	T	T	G	G	G													T	T			S									S	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	E	E	I	K	V	G	F	D	I	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	V	V	V	P	A	A	V	K	L	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions