Return to main results Retrieve Phyre Job Id

Job DescriptionP62620
Confidence64.31%DateThu Jan 5 12:07:43 GMT 2012
Rank351Aligned Residues101
% Identity15%Templatec3k30B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60........ .70.........80.....
Predicted Secondary structure 




...










.............



Query SS confidence 









. . .




































. . . . . . . . . . . . .
















Query Sequence  IGDGAPIAVQ. . . SMTNTRTTDVEATVNQIKALERVGADIVRVSVPTMDA. . . . . . . . . . . . . AEAFKLIKQQVNVPLVA
Query Conservation 


  

 

...

  
 
 
 

 
 

  
   
 




 
     .............
 

  
     




Alig confidence 









...



















.















.............
















Template Conservation   
 
  
  
         
    
       
.    
   

 
                       

     

  
Template Sequence  CAGRAAVACRITVEEEIDGGITREDIEGVLREL. GELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVG
Template Known Secondary structure  SSSSS


STTS

.TTSSS
SSS

TTT

TTTTTTTGGG
SS
Template Predicted Secondary structure 












.

























Template SS confidence 















































































   221........230.........240.........250... ......260.........270.........280.........290.........
 
   86... 90.........100. ........110.........120...
Predicted Secondary structure 

.


.








Query SS confidence 



.











.





















Query Sequence  DIHF. DYRIALKVAEYG. VDCLRINPGNIGNEERIRMVVD
Query Conservation 



.    
  
   
. 








         

 
Alig confidence 



.











.





















Template Conservation   
       
   
  
  
 
   
   


    
   
Template Sequence  VGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRD
Template Known Secondary structure 
S



TTS
SS
TT
Template Predicted Secondary structure 













Template SS confidence 







































   300.........310.........320.........330.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions