Job Description P62620 Confidence 98.94% Date Thu Jan 5 12:07:43 GMT 2012 Rank 25 Aligned Residues 206 % Identity 15% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.		.
Predicted Secondary structure																										.	.	.	.	.							.	.	.	.																																.	.							.
Query SS confidence																										.	.	.	.	.							.	.	.	.																																.	.							.
Query Sequence		T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	.	.	.	.	.	V	P	T	M	D	A	.	.	.	.	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	.	.	Y	G	V	D	C	L	.	R
Query Conservation																										.	.	.	.	.							.	.	.	.																																.	.							.
Alig confidence																										.	.	.	.	.							.	.	.	.																				.												.	.							.
Template Conservation																																																												.
Template Sequence		K	K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D	S	.	S	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	K	S	I	V	N	S
Template Known Secondary structure		T															T	T		S									T	T	S															T						T	S							.	S													S	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.			.	.	.	.	.	.	180
Predicted Secondary structure																																																																.						.	.								.	.	.
Query SS confidence																																																																.						.	.								.	.	.
Query Sequence		I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	.	D	R	L	N	F	.	.	D	Q	F	K	V	S	V	.	.	.
Query Conservation																																																																.						.	.								.	.	.
Alig confidence							.	.																																.	.	.	.	.	.	.	.																	.						.	.								.	.	.
Template Conservation							.	.																																.	.	.	.	.	.	.	.
Template Sequence		I	S	L	K	E	.	.	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	.	.	.	.	.	.	.	.	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L
Template Known Secondary structure				S	T	T	.	.																T							S			T	T					.	.	.	.	.	.	.	.	S																			T				G	G	G
Template Predicted Secondary structure							.	.																																.	.	.	.	.	.	.	.
Template SS confidence
		454	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.									490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
										181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																				.																		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																				.																		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	.	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	.	.	.	.	.	.	.	.	.	A	V	K	S	A	I	G	L	G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	A
Query Conservation		.	.	.	.	.	.	.	.																				.																		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																				.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G	I	V	N	P	G	S	V	L	Y	S	D
Template Known Secondary structure				S	S	S		G	G	G	T	T																S	T	T						B	G	G	G	G	G	G	G	G	T	T																			T	T													G	G	G
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	V	E	E	I	K	V	G	F	D	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	A	D	T	L	E	K	I	E	D	V	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		605	.	.	.	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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