Job Description P62620 Confidence 97.52% Date Thu Jan 5 12:07:43 GMT 2012 Rank 46 Aligned Residues 185 % Identity 21% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.		.	.	.	.	.	.	.	.		80	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.								.									.
Query SS confidence																																																							.	.	.	.	.	.								.									.
Query Sequence		S	T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	.	.	.	.	.	.	T	M	D	A	A	E	A	.	F	K	L	I	K	Q	Q	V	.	N	V	P	L
Query Conservation																																																							.	.	.	.	.	.								.									.
Alig confidence																																.	.	.																					.	.	.	.	.	.								.									.
Template Conservation																																.	.	.
Template Sequence		K	R	K	V	Q	V	K	N	I	T	I	G	E	G	R	P	K	I	C	V	P	I	I	G	K	N	K	K	D	I	.	.	.	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D	I	P	L
Template Known Secondary structure								T	T				T	S	S	S										S	S					.	.	.							T	T	T	S	S		S						G	G	G		T	T	T	T																	T	T	S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		84	.	.	.	.														.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		V	A	D	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	Y	R	I	A	L	K	V	A	E	Y	G	.	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.														.											.	.																				.							.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.																				.							.	.	.	.	.	.	.	.	.
Template Sequence		L	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S	R	D	Y	Y	T	T	L	N	K	E	I	S	N	T	G	L	V	D	L	I	D	V	E	L	F	M	.	.	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	.	I	I	S	N	H	D	.	.	.	.	.	.	.	.	.	F
Template Known Secondary structure								G	G	G	T		S																		T	S			S						G	G	G	.	.															T	T				.							.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																												.	.																				.							.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.										.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.												.
Query SS confidence																																					.	.	.												.
Query Sequence		G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	.	.	.	V	F	L	A	V	E	S	Y	R	L	L	.	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V
Query Conservation																																					.	.	.												.
Alig confidence				.			.	.																													.	.	.												.									.					.	.	.
Template Conservation				.			.	.																																																				.					.	.	.
Template Sequence		N	K	.	T	P	.	.	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	L	P	K	I	A	V	M	P	Q	N	E	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	.	I	T	M	S	.	.	.	M	S	G	M	G	V	I
Template Known Secondary structure		S		.			.	.															T	T		S									S	S																	T	T		S	S		B	.					.	.	.		T	G	G	G	T
Template Predicted Secondary structure				.			.	.																																																				.					.	.	.
Template SS confidence
		147	.		.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.				.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions