Return to main results Retrieve Phyre Job Id

Job DescriptionP62620
Confidence84.80%DateThu Jan 5 12:07:43 GMT 2012
Rank258Aligned Residues108
% Identity17%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60... . .....70.........80.........90.........100.
Predicted Secondary structure 








......
....









Query SS confidence 































. . . . . .
. . . .




































Query Sequence  SMTNTRTTDVEATVNQIKALERVGADIVRVSV. . . . . . P. . . . TMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYG
Query Conservation 

  
 
 
 

 
 

  
   
 




 
...... ....    
 

  
     








    
  
   
Alig confidence 










...

















......
....




































Template Conservation   
   
     ...
 
      
   


 
 

 
      
   
  
              
      
      
Template Sequence  SILSADLARLG. . . DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAG
Template Known Secondary structure  BGGGS
GGG...TT


BSSSSS
B


T

S

SS
T
Template Predicted Secondary structure 

...





























Template SS confidence 















































































   910......... 20.........30.........40.........50.........60.........70.........80.....
 
   102.......110.........120.........130.........140.....
Predicted Secondary structure 


















Query SS confidence 











































Query Sequence  VDCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDL
Query Conservation   








         

  

     





 


    
Alig confidence 










...





























Template Conservation 

 
       ...             
    
 
   
     
Template Sequence  ATSIVFHPEAS. . . EHIDRSLQLIKSFGIQAGLALNPATGIDCL
Template Known Secondary structure 
S
GGG
...S
TTTS
TT

SGGG
Template Predicted Secondary structure 





...








Template SS confidence 











































   86...90...... ...100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions