Job Description P62620 Confidence 49.07% Date Thu Jan 5 12:07:43 GMT 2012 Rank 409 Aligned Residues 138 % Identity 14% Template c3hfrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L
Query Conservation
Alig confidence																																								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	P	R	D	K	E	E	V	A	K	F	T	W	E	X	T	N	F	L	V	D	R	G	I	K	X	L	V	I	A	C	N	T	A	T	A	A	.	.	.	.	A	L	Y	D	I	R	E	K	L	D	I	P	V	.	.	.	.	.	.	.	.	.	.	.	I	G	V	I	Q	P	G	S	R	A	A	L	K	A
Template Known Secondary structure			T	T	S																												S							.	.	.	.										S	S			.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.												.	.	.	.	.	.	.	.	100	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																														.	.	.	.																							.
Query SS confidence																																														.	.	.	.																							.
Query Sequence		S	E	G	I	G	D	T	L	R	V	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I	R	S	R	G	I	N	F	I	A	C	P	T	.	.	.	.	C	S	R	Q	E	F	D	V	I	G	T	V	N	A	L	E	Q	R	L	E	D	I	.	I	T	P	M	D	V	S	I	I
Query Conservation																																														.	.	.	.																							.
Alig confidence					.	.	.	.																																						.	.	.	.																							.
Template Conservation					.	.	.	.
Template Sequence		T	R	N	.	.	.	.	N	K	I	G	V	L	G	T	L	G	T	V	E	S	X	A	Y	P	T	A	L	K	G	L	N	R	R	V	E	V	D	S	L	A	C	P	K	F	V	S	V	V	E	S	G	E	Y	K	S	A	I	A	K	K	V	V	A	E	S	L	L	P	L	K	S	T	K	I	D	T	V	I	L
Template Known Secondary structure			S	S	.	.	.	.	S														T											T	T									T	T							T	T		T	T	S												G	G	G	G	G	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		106	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		304	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		182	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions