Job Description P62620 Confidence 97.74% Date Thu Jan 5 12:07:43 GMT 2012 Rank 42 Aligned Residues 144 % Identity 17% Template c3fs2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution Resolution 1.85 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.											.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	.	.	.	.	.	.	.	.	.	.	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		N	S	T	V	K	V	G	N	V	T	F	S	N	S	A	P	L	A	L	I	A	.	G	P	C	Q	M	E	T	R	D	H	A	F	E	M	A	G	R	L	K	E	M	T	D	K	L	G	I	G	L	V	Y	K	S	S	F	D	K	A	N	I	G	L	E	K	A	L	E	V	F	S	D	L	K	K	E	Y	G	F
Template Known Secondary structure			S	S				T	T					T	T	S							.			S	B																						T								B
Template Predicted Secondary structure																							.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A
Query Conservation
Alig confidence								.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	L	T	D	I	.	H	T	E	E	Q	C	A	A	V	A	P	V	.	V	D	V	L	Q	I	P	A	F	L	C	R	Q	.	.	.	.	T	D	L	L	I	A	A	A	R	T	G	R	V	V	N	V	K	K	G	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	L	A	P	W	D	M	K	N	V	L
Template Known Secondary structure								.		S								T	T	T	.		S						G	G	G	T	T		.	.	.	.										T	T	S								T	T	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure								.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.													.	.	.	.	.	150	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		A	K	.	.	.	.	I	T	E	S	G	N	P	N	V	L	A
Template Known Secondary structure				.	.	.	.			T	T	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		155	.					.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions