Job Description P62620 Confidence 53.38% Date Thu Jan 5 12:07:43 GMT 2012 Rank 394 Aligned Residues 165 % Identity 15% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																									.	.	.	.	.	.	.	.																			.	.											.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.																			.	.											.	.	.
Query Sequence		D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	.	.	.	.	.	.	.	.	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	.	.	V	P	L	V	A	D	I	H	F	D	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.																			.	.											.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.																			.	.											.	.	.
Template Conservation
Template Sequence		G	I	F	P	V	V	P	T	T	F	A	D	T	G	D	L	D	L	A	S	Q	K	R	A	V	D	F	M	I	D	A	G	S	D	G	L	C	I	L	A	N	F	S	E	Q	F	A	I	T	D	D	E	R	D	V	L	T	R	T	I	L	E	H	V	A	G	R	V	P	V	I	V	T	T	S	H	Y	S	T	Q
Template Known Secondary structure						B					B		T	T	S	S	B															T	T		S					S	S	G	G	G	T	G	G	G	S																	T	T	S	S									S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
				91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.																				.	.	.	.	.	.
Query SS confidence		.	.																				.	.	.	.	.	.
Query Sequence		.	.	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	.	.	.	.	.	.	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M
Query Conservation		.	.																				.	.	.	.	.	.
Alig confidence		.	.																				.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		V	C	A	A	R	S	L	R	A	Q	Q	L	G	A	A	M	V	M	A	M	P	P	Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	D	A	I	A	I	P	I	M	V	.	.	.	.	.	.	.	.	Q	D	A	P	A	S	G	T	A	L	S	A	P	F	L	A	R	M	A	R
Template Known Secondary structure													T	T		S							S		B	T	T	T	B																			S	S					.	.	.	.	.	.	.	.				G	G	G
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	.	.	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G
Query Conservation																					.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.
Template Sequence		E	.	.	.	.	.	.	.	.	.	.	I	E	Q	V	A	Y	F	K	I	E	T	P	G	A	A	N	K	L	R	E	L	I	R	L	G	G	D	A	I	E	G	P	W	D	G
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	S	T	T								S	T	T													G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174											.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions