Job Description P62620 Confidence 84.54% Date Thu Jan 5 12:07:43 GMT 2012 Rank 260 Aligned Residues 123 % Identity 24% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																																					.	.	.	.	.	.	.	.	80	.	.		.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	A	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	L	I	K	Q	Q	V	N	V	P	.	L	V	A	D
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		T	V	P	K	L	Q	A	M	R	E	A	G	E	K	I	A	M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D
Template Known Secondary structure												T	T										S										T	T		S						T	T					T	T			S	S	S	T	T																T			S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		87	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																											.	.
Query SS confidence						.	.	.	.	.	.	.	.																																											.	.
Query Sequence		I	H	F	D	.	.	.	.	.	.	.	.	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	.	.	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A
Query Conservation						.	.	.	.	.	.	.	.																																											.	.
Alig confidence						.	.	.	.	.	.	.	.																					.	.	.	.	.																		.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	M	V	K	L	E	G	G	.	.	.	.	.	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	Q
Template Known Secondary structure				T	T	S		S	S														T	T		S								.	.	.	.	.	G	G	G										T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																	.	.	140	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		L	L	R	D	A	R	A	.	.	.	.	V	E	E	A	G	A	Q	L	I	V	L	E	A	V	P	T	L	V	A	A	E	V	T	R
Template Known Secondary structure									.	.	.	.					T		S						S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions