Job Description P62620 Confidence 49.65% Date Thu Jan 5 12:07:43 GMT 2012 Rank 407 Aligned Residues 145 % Identity 19% Template c3epmB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:thiamine biosynthesis protein thic; PDBTitle: crystal structure of caulobacter crescentus thic Resolution 2.79 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		X	A	I	G	R	N	F	L	V	K	I	N	A	N	I	G	N	T	.	.	.	V	A	D	E	V	D	K	L	V	W	A	T	R	W	G	A	D	T	V	X	D	L	S	T	G	R	N	I	H	N	I	R	D	W	I	I	R	N	S	S	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	V	A
Template Known Secondary structure				B	S	T	T	S												.	.	.														T	T		S								S	T	T											T		S	S														T	T	T		G
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		85	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		A	D	I	H	F	D	Y	.	.	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M
Query Conservation									.	.
Alig confidence									.	.																					.	.	.	.	.	.										.	.																											.	.	.	.	.
Template Conservation																															.	.	.	.	.	.										.	.																											.	.	.	.	.
Template Sequence		E	D	L	N	W	E	V	F	R	D	T	L	I	E	Q	C	E	Q	G	V	D	Y	F	T	I	H	A	G	V	.	.	.	.	.	.	R	L	P	F	I	P	X	T	A	.	.	K	R	V	T	G	I	V	S	R	G	G	S	I	X	A	K	W	C	L	A	H	H	K	E	N	F	.	.	.	.	.	L	Y	E
Template Known Secondary structure		G	G																	T								T	T		.	.	.	.	.	.		T	T	T	G	G	G	G	T	.	.	T	S	S	S																			S				.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.										.	.																											.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.							.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	D	E	I	C	E	I	X	R	A	Y	D	V	S	F	S	L
Template Known Secondary structure		S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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