Job Description P62620 Confidence 94.56% Date Thu Jan 5 12:07:43 GMT 2012 Rank 151 Aligned Residues 208 % Identity 17% Template c3e49A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold; PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution Resolution 1.75 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.											.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																.
Query Sequence		E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	.	.	.	.	.	.	.	.	.	.	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	.	.	.	.	.	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	.	Y	G	V	D	C	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																.
Alig confidence																													.	.	.	.	.	.	.	.	.	.														.			.	.	.	.	.																.
Template Conservation																																																				.
Template Sequence		D	E	V	A	Q	A	S	I	G	A	A	E	A	G	A	A	V	I	H	L	H	A	R	D	P	R	D	G	R	P	T	Q	D	P	A	A	F	A	E	F	L	P	R	I	K	S	N	T	D	A	.	V	I	N	L	T	T	G	G	S	P	H	X	T	V	E	E	R	L	R	P	A	T	H	Y	X	P	E	L	A
Template Known Secondary structure															T		S									T	T	T											T	T												.						S		S		T	T	S															S
Template Predicted Secondary structure																																																				.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		106	.	.	.	110			.	.	.																															.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure							.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	N	P	G	.	.	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T
Query Conservation							.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Sequence		S	L	N	X	G	S	X	N	F	G	L	Y	P	X	L	E	R	F	K	E	F	A	H	G	W	E	R	E	H	L	E	R	S	R	D	L	V	F	K	N	T	F	A	D	I	E	F	I	L	K	T	C	G	G	N	G	T	R	F	E	F	E	C	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	T	.	.
Template Known Secondary structure						S							G	G	G	G	G	T					S	S									G	G	G	G																			T	T	T								.	.	.	.	.	.	.	.	.	.	.	.		S		.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.													.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																	.	.	.
Query SS confidence															.	.																	.	.	.
Query Sequence		P	Q	A	L	L	E	S	A	M	R	H	V	D	.	.	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	.	.	.	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L
Query Conservation															.	.																	.	.	.
Alig confidence		.	.												.	.																	.	.	.
Template Conservation		.	.
Template Sequence		.	.	S	H	L	Y	N	L	A	H	F	V	D	R	K	L	A	T	P	P	F	F	V	Q	T	V	F	G	L	L	G	G	I	G	P	H	P	E	D	L	A	H	X	R	R	T	A	D	R	L	F	G	A	D	Y	V	W	S	I	L	G	A	G	R	H	Q	I	P	L	A	S	I	G	A	A	Q	G	A	N	V
Template Known Secondary structure		.	.												T	T		S		S	S								S		T	T	S																				G	G	G									G	G	G										T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		229	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		S	E	G	I	G	D	T	L	R	V	.	.	.	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I	R	S	R	G	I	N
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		R	V	G	L	E	D	S	L	W	I	A	P	G	E	L	A	E	T	N	A	A	Q	V	R	K	I	R	Q	V	I	E	G	L	S	L	E	V	A	S	P	A
Template Known Secondary structure					T	T	T		S				T	T				S																T	T			B
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions