Job Description P62620 Confidence 52.38% Date Thu Jan 5 12:07:43 GMT 2012 Rank 397 Aligned Residues 144 % Identity 17% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.						.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																										.	.	.	.	.					.	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.					.	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	.	.	.	.	.	T	M	D	A	.	.	.	.	.	A	E	A	F	K	L	I	K	Q	Q	V	.	.	.	.	.	.	.	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D
Query Conservation																										.	.	.	.	.					.	.	.	.	.												.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.					.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D
Template Known Secondary structure															T	T		S							T	T	G	G	G	S									T											S		S			T	T										T	T	T	T	T	T						T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.						.	.	.	.
Predicted Secondary structure																																																																			.						.	.	.	.	.
Query SS confidence																																																																			.						.	.	.	.	.
Query Sequence		C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	.	D	R	L	N	F	.	.	.	.	.	D	Q	F	K
Query Conservation																																																																			.						.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																.	.	.										.	.			.	.																	.						.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																.	.	.										.	.			.	.
Template Sequence		A	L	G	L	D	W	T	T	.	.	.	.	.	.	.	.	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	.	.	.	Q	G	N	M	D	P	S	M	L	.	.	Y	A	.	.	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H
Template Known Secondary structure							T	T	S	.	.	.	.	.	.	.	.										T	T	T	S			.	.	.				B		G	G	G	G	.	.	G	S	.	.														T	T	T	T	T	S	S				B		B	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																.	.	.										.	.			.	.
Template SS confidence
		266	.	.	.	270	.	.	.									.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.			.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	V	P	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E	Q	Y
Template Known Secondary structure		T	T	S																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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